BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G07LP1|AL426582
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1560 0.0
>3x_Contig1446
Length = 10598
Score = 1560 bits (785), Expect = 0.0
Identities = 804/811 (99%), Gaps = 1/811 (0%)
Strand = Plus / Minus
Query: 5 atatttatttaggatcccaacaattaagttagtatgtgcactttttgttgctgggtcaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6480 atatttatttaggatcccaacaattaagttagtatgtgcactttttgttgctgggtcaat 6421
Query: 65 aaattacaacagcgttttcccattttttcaagcttcatttcttccacggtaaactttcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6420 aaattacaacagcgttttcccattttttcaagcttcatttcttccacggtaaactttcaa 6361
Query: 125 tatcgtacggaaaaataaagaaaactttaaaattagaaacgttgcatacacagcaaggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6360 tatcgtacggaaaaataaagaaaactttaaaattagaaacgttgcatacacagcaaggaa 6301
Query: 185 ataaaactaactgccatattggcaccagcctggtattctataggtttagatttaattaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6300 ataaaactaactgccatattggcaccagcctggtattctataggtttagatttaattaat 6241
Query: 245 attatagtgtatgctggttttttaacttactggctctcaatcgaagcatatggraataga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6240 attatagtgtatgctggttttttaacttactggctctcaatcgaagcatatggaaataga 6181
Query: 305 aacaatagtgttactgaggragaggggrgattttctcgtgcttcagtttcagagtttctc 364
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6180 aacaatagtgttactgaggaagaggggagattttctcgtgcttcagtttcagagtttctc 6121
Query: 365 ttggtgaatccgattttgacagataatcagatcagatcatatttcagttactcgagtggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6120 ttggtgaatccgattttgacagataatcagatcagatcatatttcagttactcgagtggc 6061
Query: 425 tgaacagctatgcgtctatttctcttattttccgctcttgtgaattcttattcctataat 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6060 tgaacagctatgcgtctatttctcttattttccgctcttgtgaattcttattcctataac 6001
Query: 485 tctggggaacctcgacatgaaggctccaaaaaccagcattacccgtcaaaatagtaactg 544
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6000 tctggggaa-ctcgacatgaaggctccaaaaaccagcattacccgtcaaaatagtaactg 5942
Query: 545 tgactgctgtgagggcaagtggaaatgtgtccggtatgctttttcccagttcctgctagg 604
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 taactgctgtaagggcaagtggaaatgtgtccggtatgctttttcccagttcctgctagg 5882
Query: 605 taccttcctgtagttgaacctgcatgacacatgcttgtttttactgaatttgttattgtt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5881 taccttcctgtagttgaacctgcatgacacatgcttgtttttactgaatttgttattgtt 5822
Query: 665 agatcatgacagggtccatcatcttgtcattttaggtgaagggtgtggcgatacccatcc 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 agatcatgacagggtccatcatcttgtcattttaggtgaagggtgtggcgatacccatcc 5762
Query: 725 gatgtttgaacattcccagaatttagatttatatataaagggtcctcctggttatcaaac 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5761 gatgtttgaacattcccagaatttagatttatatataaagggtcctcctggttatcaaac 5702
Query: 785 tggattgtccccgccatctattcatatctta 815
|||||||||||||||||||||||||||||||
Sbjct: 5701 tggattgtccccgccatctattcatatctta 5671
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6214
Number of Sequences: 1807
Number of extensions: 6214
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)